Chapter 28 vif

title: "Introduction"
author: "chinsoon12"
date: "April 10, 2016"
output: html_document
library(htmltools)
vif_calc_QC

TODO

  • TODO: plot regressors in different colors
  • TODO: return the regressors with high VIF
  • flag runs that aren't usable.

ses-01, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)

<AxesSubplot:title={'center':'VIF: all 18 runs'}, xlabel='feature', ylabel='VIF'>

<<insertHTML:[vif_calc_QC.html]

etc, etc, etc

vif_calc_QC

TODO

  • TODO: plot regressors in different colors
  • TODO: return the regressors with high VIF
  • flag runs that aren't usable.

ses-01, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-01, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-03, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-01

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-02

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-03

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-04

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-05

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()

ses-04, run-06

/Users/h/anaconda3/envs/spacetop_datalad/lib/python3.9/site-packages/nltools/file_reader.py:79: UserWarning: Only 2 columns in file, assuming all stimuli are the same duration
  warnings.warn(

/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:76: UserWarning: FixedFormatter should only be used together with FixedLocator
  fullvif.set_xticklabels(fullvif.get_xticklabels(), rotation = 60, fontsize = 8)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2976153650.py:79: UserWarning: Matplotlib is currently using module://matplotlib_inline.backend_inline, which is a non-GUI backend, so cannot show the figure.
  f.show()
/var/folders/w8/z3vy42z17hq5gc9r_5hzsgxw0000gn/T/ipykernel_8185/2602223103.py:29: UserWarning: FixedFormatter should only be used together with FixedLocator
  ax.set_xticklabels(vif_data["feature"].tolist(), rotation = 60, fontsize = 10)

<AxesSubplot:title={'center':'VIF: all 18 runs'}, xlabel='feature', ylabel='VIF'>

'{r, child="/Users/h/Dropbox/projects_dropbox/social_influence_analysis/scripts/step02_R_bookdown/vif_calc_QC.html", eval=TRUE} # empty chunk content, only inserting all content of HTML_test.html here \